STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0097Regulator of polyketide synthase expression-like protein; KEGG: sco:SCO1052 regulatory protein. (524 aa)    
Predicted Functional Partners:
Noca_0098
PFAM: protein of unknown function DUF917; KEGG: mes:Meso_1849 protein of unknown function DUF917.
 
     0.949
Noca_0096
PFAM: protein of unknown function DUF917; KEGG: mlo:mll9130 hypothetical protein.
 
     0.784
Noca_0095
PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: mlo:mll9131 hydantoinase.
 
     0.747
Noca_4149
Transcriptional regulator, CdaR family; PFAM: purine catabolism PurC domain protein; KEGG: sco:SCO7033 regulatory protein.
  
     0.621
Noca_3378
Transcriptional regulator, CdaR family; PFAM: purine catabolism PurC domain protein; KEGG: mmc:Mmcs_5287 transcriptional regulator, CdaR.
  
     0.540
Noca_4625
Transcriptional regulator, CdaR family; PFAM: purine catabolism PurC domain protein; KEGG: rha:RHA1_ro04467 possible transcriptional regulator.
  
     0.525
Noca_0102
Dipeptidase, Metallo peptidase, MEROPS family M19; PFAM: peptidase M19, renal dipeptidase; KEGG: dsy:DSY1937 hypothetical protein.
 
     0.509
Noca_0100
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro09082 ABC sugar transporter, ATP-binding component; TC 3.A.1.2.-.
  
    0.503
Noca_0099
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: rha:RHA1_ro02908 possible ABC sugar transporter, substrate binding component; TC 3.A.1.2.-.
       0.500
Noca_0589
KEGG: rha:RHA1_ro03774 hypothetical protein.
  
     0.454
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.