STRINGSTRING
Noca_0097 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0097" - Regulator of polyketide synthase expression-like in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0097Regulator of polyketide synthase expression-like (524 aa)    
Predicted Functional Partners:
Noca_0098
Hypothetical protein (358 aa)
 
          0.969
Noca_0095
Hydantoinase/oxoprolinase (517 aa)
 
          0.832
Noca_0096
Hypothetical protein (366 aa)
 
          0.803
Noca_4149
Purine catabolism PurC domain-containing protein (509 aa)
   
          0.657
Noca_1111
Hypothetical protein (328 aa)
   
          0.635
Noca_0159
Hypothetical protein (400 aa)
   
          0.610
Noca_1487
Hypothetical protein (438 aa)
   
          0.574
Noca_0100
ABC transporter-like protein (527 aa)
              0.568
Noca_0099
Sugar ABC transporter periplasmic component-like protein (400 aa)
              0.568
Noca_2620
Hypothetical protein (413 aa)
   
          0.564
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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