STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0098PFAM: protein of unknown function DUF917; KEGG: mes:Meso_1849 protein of unknown function DUF917. (358 aa)    
Predicted Functional Partners:
Noca_0095
PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: mlo:mll9131 hydantoinase.
    0.976
Noca_0097
Regulator of polyketide synthase expression-like protein; KEGG: sco:SCO1052 regulatory protein.
 
     0.949
Noca_0102
Dipeptidase, Metallo peptidase, MEROPS family M19; PFAM: peptidase M19, renal dipeptidase; KEGG: dsy:DSY1937 hypothetical protein.
 
     0.532
Noca_0079
5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: mta:Moth_1967 5-oxoprolinase (ATP-hydrolyzing).
 
    0.515
Noca_0099
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: rha:RHA1_ro02908 possible ABC sugar transporter, substrate binding component; TC 3.A.1.2.-.
       0.500
Noca_0100
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro09082 ABC sugar transporter, ATP-binding component; TC 3.A.1.2.-.
       0.500
Noca_0101
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: rha:RHA1_ro11174 ABC sugar transporter, permease component; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
       0.436
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.