STRINGSTRING
Noca_0106 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0106" - Peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0106Peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins (209 aa)    
Predicted Functional Partners:
Noca_3454
Hypothetical protein (396 aa)
   
          0.768
Noca_0107
Aldo/keto reductase (294 aa)
              0.659
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan (364 aa)
       
    0.553
Noca_2678
Glyoxalase/bleomycin resistance protein/dioxygenase (136 aa)
   
          0.472
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein (461 aa)
       
    0.469
Noca_1754
Glycosyl transferase family protein (394 aa)
       
    0.455
Noca_2620
Hypothetical protein (413 aa)
   
          0.451
Noca_3511
Membrane-flanked domain-containing protein (165 aa)
   
          0.444
Noca_0735
Regulatory protein TetR (204 aa)
   
          0.434
Noca_3842
Bifunctional deaminase-reductase-like protein (185 aa)
   
          0.411
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (32%) [HD]