STRINGSTRING
Noca_0119 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0119" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0119Hypothetical protein (246 aa)    
Predicted Functional Partners:
Noca_2467
Hypothetical protein (266 aa)
   
          0.773
Noca_0118
Hypothetical protein (286 aa)
              0.643
Noca_3499
HNH endonuclease (117 aa)
   
          0.624
Noca_2809
HNH endonuclease (255 aa)
   
          0.586
Noca_1280
HNH nuclease (414 aa)
   
          0.583
Noca_3549
Integral membrane protein (277 aa)
   
          0.548
Noca_2243
ATP-binding protein (512 aa)
   
          0.535
Noca_1463
HNH nuclease (414 aa)
   
          0.529
Noca_1741
HNH nuclease (414 aa)
   
          0.523
Noca_0121
ABC transporter (252 aa)
              0.517
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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