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Noca_0123 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0123" - Regulatory protein TetR in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0123Regulatory protein TetR (187 aa)    
Predicted Functional Partners:
Noca_0122
Alkane 1-monooxygenase (481 aa)
 
          0.912
Noca_4417
Nuclear transport factor 2 (150 aa)
   
          0.700
Noca_4547
Type 11 methyltransferase (254 aa)
   
          0.637
Noca_1384
Hypothetical protein (184 aa)
   
          0.600
Noca_2229
Peptidoglycan-binding LysM (1086 aa)
   
          0.596
Noca_3995
Alpha/beta hydrolase fold protein (465 aa)
   
          0.593
Noca_4558
RDD domain-containing protein (272 aa)
   
          0.590
Noca_0117
PadR family transcriptional regulator (204 aa)
   
          0.561
Noca_2336
Hypothetical protein (144 aa)
   
          0.552
Noca_1271
Peptidase S1 and S6, chymotrypsin/Hap (280 aa)
   
          0.534
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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