STRINGSTRING
Noca_0142 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0142" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0142Hypothetical protein (134 aa)    
Predicted Functional Partners:
Noca_0143
Thioredoxin (126 aa)
 
          0.894
Noca_0141
Hypothetical protein (87 aa)
              0.878
Noca_0144
MMPL domain-containing protein (718 aa)
              0.647
Noca_0145
Hypothetical protein (55 aa)
              0.574
Noca_4522
Hypothetical protein (284 aa)
   
          0.531
Noca_0140
TetR family transcriptional regulator (182 aa)
              0.531
Noca_2519
Hypothetical protein (100 aa)
   
          0.444
Noca_0971
Type 12 methyltransferase (210 aa)
   
          0.420
Noca_1673
Hypothetical protein (211 aa)
 
          0.415
Noca_2925
Multicopper oxidase, type 3 (536 aa)
              0.408
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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