STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0145KEGG: cgb:cg1481 hypothetical protein. (55 aa)    
Predicted Functional Partners:
Noca_0141
PFAM: protein of unknown function DUF156; KEGG: cef:CE0057 hypothetical protein.
 
     0.796
Noca_0144
PFAM: MMPL domain protein; KEGG: nfa:pnf2660 hypothetical protein.
       0.693
Noca_0142
PFAM: protein of unknown function DUF302; KEGG: nfa:nfa41010 hypothetical protein.
       0.609
Noca_3981
Transcriptional regulator; PFAM: LexA DNA-binding domain protein; KEGG: mpa:MAP2725c hypothetical protein.
  
     0.518
Noca_0143
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: nfa:nfa18780 putative thioredoxin; Belongs to the thioredoxin family.
       0.516
Noca_4305
KEGG: rha:RHA1_ro08261 possible transcriptional regulator, MarR family.
  
     0.468
Noca_1344
Transcriptional regulator, ArsR family; PFAM: regulatory protein, ArsR; LexA DNA-binding domain protein; KEGG: mpa:MAP2725c hypothetical protein.
  
     0.456
Noca_0146
PFAM: Hyalin; KEGG: hch:HCH_03306 protein of unknown function (DUF1555).
       0.448
Noca_1647
KEGG: nfa:pnf2590 putative alkylmercury lyase.
  
     0.443
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.