STRINGSTRING
Noca_0146 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0146" - Hyalin in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0146Hyalin (521 aa)    
Predicted Functional Partners:
Noca_3099
Major facilitator transporter (433 aa)
   
          0.683
Noca_1872
Hypothetical protein (86 aa)
   
          0.553
Noca_2831
Hemerythrin HHE cation binding domain-containing protein (184 aa)
   
          0.539
Noca_0147
propionyl-CoA carboxylase (503 aa)
              0.535
Noca_0145
Hypothetical protein (55 aa)
              0.500
Noca_0144
MMPL domain-containing protein (718 aa)
              0.458
Noca_3263
Beta-glucosidase (678 aa)
   
   
    0.433
Noca_3830
Ferric reductase domain-containing protein (195 aa)
   
          0.429
Noca_0148
Carbamoyl-phosphate synthase subunit L (634 aa)
              0.406
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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