STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0152Hypothetical protein. (404 aa)    
Predicted Functional Partners:
Noca_0150
KEGG: syd:Syncc9605_2166 hypothetical protein.
 
    
0.802
Noca_0151
Hypothetical protein.
       0.781
leuC
3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
 
 0.748
Noca_3936
KEGG: sma:SAV5466 hypothetical protein.
  
     0.748
Noca_0149
hydroxymethylglutaryl-CoA lyase; PFAM: pyruvate carboxyltransferase; KEGG: sma:SAV5276 putative hydroxymethylglutaryl-CoA lyase.
  
  
 0.718
Noca_3760
KEGG: sma:SAV5466 hypothetical protein.
  
     0.716
Noca_1454
KEGG: sma:SAV5466 hypothetical protein.
  
     0.713
Noca_3755
KEGG: sma:SAV5466 hypothetical protein.
  
     0.704
Noca_0266
Lipoprotein; KEGG: sco:SCO7393 lipoprotein.
  
     0.697
Noca_1450
KEGG: sma:SAV5466 hypothetical protein.
  
     0.690
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.