STRINGSTRING
Noca_0159 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0159" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0159Hypothetical protein (400 aa)    
Predicted Functional Partners:
Noca_2684
Hypothetical protein (245 aa)
 
          0.685
Noca_2332
Regulatory protein TetR (189 aa)
   
          0.649
Noca_0097
Regulator of polyketide synthase expression-like (524 aa)
   
          0.610
Noca_3078
Hypothetical protein (143 aa)
   
          0.589
Noca_0161
Glycerophosphoryl diester phosphodiesterase (265 aa)
              0.566
Noca_0160
methylmalonyl-CoA epimerase (122 aa)
              0.566
Noca_0162
SecC motif-containing protein (312 aa)
              0.555
Noca_0158
Hypothetical protein (140 aa)
              0.534
Noca_0656
Hypothetical protein (299 aa)
   
          0.524
Noca_3001
Hypothetical protein (555 aa)
   
          0.516
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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