STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0160methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mlr1095 hypothetical protein. (122 aa)    
Predicted Functional Partners:
Noca_0161
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sma:SAV4224 putative phosphodiesterase.
       0.779
Noca_0162
PFAM: SEC-C motif domain protein; KEGG: sma:SAV4226 hypothetical protein.
       0.763
Noca_1050
Hypothetical protein.
  
     0.575
Noca_3114
PFAM: SAF domain; KEGG: sus:Acid_4161 SAF domain.
  
     0.524
Noca_0159
KEGG: rha:RHA1_ro02400 hypothetical protein.
       0.505
Noca_0147
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: sco:SCO2776 acetyl/propionyl CoA carboxylase, beta subunit.
     
  0.499
Noca_0798
KEGG: sus:Acid_6472 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase.
     
  0.499
Noca_1772
KEGG: sma:SAV1912 putative methylmalonyl-CoA mutase, coenzyme B12-dependent alpha subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein.
     
  0.499
Noca_1802
KEGG: sma:SAV2832 putative isobutyryl-CoA mutase, chain A; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase.
     
  0.499
Noca_1986
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: mmc:Mmcs_3368 propionyl-CoA carboxylase.
     
  0.499
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.