STRINGSTRING
Noca_0163 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0163" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0163Hypothetical protein (284 aa)    
Predicted Functional Partners:
Noca_0164
Adenylyl cyclase class-3/4/guanylyl cyclase (371 aa)
              0.792
Noca_0165
Cyclic nucleotide-binding protein (124 aa)
              0.631
Noca_0166
Arginine deiminase (407 aa)
              0.453
Noca_0197
Alpha amylase catalytic subunit (925 aa)
   
          0.440
Noca_0514
Lysine exporter protein LysE/YggA (202 aa)
   
          0.422
Noca_1899
TM2 domain-containing protein (155 aa)
   
          0.414
Noca_0169
Circadian phase modifier CpmA (228 aa)
              0.403
Noca_0168
Hypothetical protein (393 aa)
              0.403
Noca_0167
Hypothetical protein (196 aa)
              0.403
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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