Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_0185PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: fra:Francci3_3765 biotin/lipoyl attachment. (77 aa)    
Predicted Functional Partners:
Noca_4502
PFAM: carboxyl transferase; Enoyl-CoA hydratase/isomerase; KEGG: rha:RHA1_ro02935 acetyl-CoA carboxylase carboxyl transferase subunit.
  
 
 0.966
Noca_1990
KEGG: tfu:Tfu_1973 acyl-carrier-protein S-malonyltransferase.
  
 
 0.908
Noca_1986
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: mmc:Mmcs_3368 propionyl-CoA carboxylase.
 
 0.747
Noca_0147
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: sco:SCO2776 acetyl/propionyl CoA carboxylase, beta subunit.
  
 0.694
Noca_1248
PFAM: carboxyl transferase; KEGG: cdi:DIP0740 methylmalonyl-CoA decarboxylase, alpha-subunit.
  
 0.694
Noca_3495
PFAM: carboxyl transferase; KEGG: sco:SCO4926 propionyl-CoA carboxylase complex B subunit.
  
 0.694
Noca_4136
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: ade:Adeh_0250 carboxyl transferase.
  
 0.694
Noca_4552
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: rha:RHA1_ro01931 probable methylcrotonoyl-CoA carboxylase, beta chain.
  
 0.694
Noca_0183
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: nfa:nfa46820 putative hydrolase.
   
 
 0.686
Noca_0184
Hypothetical protein.
       0.670
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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