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Noca_0211 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0211" - 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_02115-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase (284 aa)    
Predicted Functional Partners:
Noca_0209
acyl-CoA dehydrogenase type 2 (391 aa)
              0.841
Noca_0210
Alpha/beta hydrolase fold protein (279 aa)
              0.840
Noca_0207
Glyoxalase/bleomycin resistance protein/dioxygenase (305 aa)
   
   
  0.768
Noca_1737
Alpha-ketoglutarate decarboxylase (1263 aa)
   
    0.762
Noca_0206
acyl-CoA dehydrogenase type 2 (391 aa)
 
          0.754
Noca_2151
4-oxalocrotonate decarboxylase (271 aa)
   
 
  0.749
Noca_2055
4-oxalocrotonate decarboxylase (259 aa)
   
 
  0.749
Noca_1651
4-oxalocrotonate decarboxylase (275 aa)
   
 
  0.749
Noca_0208
Alpha/beta hydrolase fold protein (291 aa)
              0.718
Noca_3757
L-threonine 3-dehydrogenase (346 aa)
   
    0.649
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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