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Noca_0216 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0216" - ABC transporter-like protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0216ABC transporter-like protein (565 aa)    
Predicted Functional Partners:
Noca_0215
ABC transporter-like protein (248 aa)
 
 
0.974
Noca_1838
Inner-membrane translocator (290 aa)
 
  0.969
Noca_3013
Inner-membrane translocator (500 aa)
 
 
  0.965
Noca_0217
Inner-membrane translocator (309 aa)
 
          0.956
Noca_4104
Inner-membrane translocator (290 aa)
 
  0.942
Noca_2113
Inner-membrane translocator (302 aa)
 
  0.940
Noca_4442
Inner-membrane translocator (294 aa)
 
  0.939
Noca_2147
Inner-membrane translocator (290 aa)
 
  0.931
Noca_1842
Extracellular ligand-binding receptor (394 aa)
 
 
  0.930
Noca_4127
Extracellular ligand-binding receptor (400 aa)
 
 
  0.927
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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