STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0264KEGG: cya:CYA_2465 GTP-binding protein. (383 aa)    
Predicted Functional Partners:
cobB
PFAM: Silent information regulator protein Sir2; KEGG: sal:Sala_2748 silent information regulator protein Sir2; Belongs to the sirtuin family. Class III subfamily.
       0.714
Noca_0263
Hypothetical protein.
       0.588
Noca_0449
KEGG: sco:SCO3402 secreted protein.
  
     0.478
Noca_2647
KEGG: mpa:MAP1247 hypothetical protein.
  
     0.452
Noca_0266
Lipoprotein; KEGG: sco:SCO7393 lipoprotein.
       0.449
Noca_0927
KEGG: mpa:MAP3892 hypothetical protein.
  
     0.438
Noca_1714
KEGG: mpa:MAP3318c hypothetical protein.
  
     0.438
Noca_0262
Hypothetical protein.
       0.428
Noca_1943
Hypothetical protein; KEGG: rha:RHA1_ro10028 possible peptidase.
  
     0.414
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.