STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0271PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rha:RHA1_ro08138 long-chain-acyl-CoA dehydrogenase. (381 aa)    
Predicted Functional Partners:
Noca_2854
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: tfu:Tfu_1904 fatty acid oxidation complex alpha-subunit.
 
 0.797
Noca_4562
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mpa:MAP0790 enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase.
  
 0.769
Noca_0804
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_5189 acyl-CoA dehydrogenase-like protein.
  
     0.751
Noca_0639
PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: sco:SCO1081 putative electron transfer flavoprotein, alpha subunit.
 
 
 0.738
Noca_1816
PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: sco:SCO1081 putative electron transfer flavoprotein, alpha subunit.
 
 
 0.737
Noca_1815
PFAM: electron transfer flavoprotein beta-subunit; KEGG: sco:SCO1082 putative electron transfer flavoprotein, beta subunit.
 
 
 0.706
Noca_0640
PFAM: electron transfer flavoprotein beta-subunit; KEGG: sco:SCO1082 putative electron transfer flavoprotein, beta subunit.
 
 
 0.703
Noca_0270
PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro04813 multidrug resistance transporter, MFS superfamily.
       0.695
Noca_0272
PFAM: protein of unknown function DUF125, transmembrane; KEGG: sma:SAV6445 hypothetical protein.
       0.561
Noca_0861
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: gka:GK2036 3-hydroxybutyryl-CoA dehydrogenase.
  
 0.537
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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