STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0281KEGG: rha:RHA1_ro04896 hypothetical protein. (198 aa)    
Predicted Functional Partners:
Noca_0414
PFAM: peptidase S15; X-Pro dipeptidyl-peptidase C-terminal domain protein; KEGG: nfa:nfa43000 putative esterase.
  
     0.697
Noca_0280
(S)-2-hydroxy-acid oxidase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: nfa:nfa32960 putative L-lactate dehydrogenase.
       0.680
Noca_2108
PFAM: peptidase S15; X-Pro dipeptidyl-peptidase C-terminal domain protein; KEGG: nfa:nfa43000 putative esterase.
  
     0.617
Noca_0279
PFAM: ferredoxin-dependent glutamate synthase; KEGG: mmc:Mmcs_5268 ferredoxin-dependent glutamate synthase; Belongs to the glutamate synthase family.
  
    0.498
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.