STRINGSTRING
Noca_0284 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0284" - Signal-transduction protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0284Signal-transduction protein (68 aa)    
Predicted Functional Partners:
Noca_0283
Hypothetical protein (109 aa)
   
          0.740
Noca_3512
Membrane-flanked domain-containing protein (491 aa)
   
          0.640
Noca_0182
Molybdopterin-guanine dinucleotide biosynthesis protein (205 aa)
   
          0.596
Noca_3973
Hypothetical protein (398 aa)
   
          0.595
Noca_3085
Hypothetical protein (140 aa)
   
          0.594
Noca_3511
Membrane-flanked domain-containing protein (165 aa)
   
          0.533
Noca_0285
Putative DNA-binding protein (68 aa)
 
       
0.519
Noca_4290
ATPase domain-containing protein (315 aa)
   
          0.504
Noca_2467
Hypothetical protein (266 aa)
   
          0.503
Noca_0633
Hypothetical protein (397 aa)
   
          0.502
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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