STRINGSTRING
Noca_0293 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0293" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0293Hypothetical protein (479 aa)    
Predicted Functional Partners:
Noca_0294
Hypothetical protein (134 aa)
              0.700
Noca_1994
Hypothetical protein (147 aa)
   
          0.595
Noca_1472
Hypothetical protein (73 aa)
   
          0.576
Noca_1215
Hypothetical protein (437 aa)
   
          0.574
Noca_3731
Hypothetical protein (456 aa)
   
          0.551
Noca_3244
Peptidase M23B (211 aa)
   
          0.545
Noca_0008
Hypothetical protein (172 aa)
   
          0.544
Noca_0295
Aspartate aminotransferase (393 aa)
              0.539
Noca_3691
Hypothetical protein (189 aa)
   
          0.530
Noca_2107
Hypothetical protein (204 aa)
   
          0.523
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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