STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0299KEGG: pac:PPA2178 hypothetical protein. (166 aa)    
Predicted Functional Partners:
Noca_0300
KEGG: fal:FRAAL0085 hypothetical protein.
       0.855
Noca_4682
KEGG: sco:SCO3895 hypothetical protein.
  
     0.763
Noca_0449
KEGG: sco:SCO3402 secreted protein.
  
     0.753
Noca_3586
Hypothetical protein; KEGG: sma:SAV3318 putative RNA polymerase ECF-subfamily sigma factor.
  
     0.751
Noca_3369
KEGG: dra:DR0603 cytidine/deoxycytidylate deaminase/NUDIX/methyltransferase domains protein.
  
     0.749
Noca_0795
KEGG: sco:SCO3177 hypothetical protein.
  
     0.723
Noca_0153
KEGG: pac:PPA2088 hypothetical protein.
  
     0.715
Noca_1427
KEGG: pac:PPA1688 hypothetical protein.
  
     0.703
Noca_0436
KEGG: pca:Pcar_1759 hypothetical protein.
 
     0.695
Noca_1217
KEGG: rha:RHA1_ro02410 hypothetical protein.
  
     0.689
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.