STRINGSTRING
Noca_0309 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0309" - Peptidase S8/S53 subtilisin kexin sedolisin in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0309Peptidase S8/S53 subtilisin kexin sedolisin (424 aa)    
Predicted Functional Partners:
Noca_0308
Hypothetical protein (482 aa)
          0.949
Noca_0307
Hypothetical protein (451 aa)
 
          0.948
Noca_0303
Cell division protein FtsK (1326 aa)
 
          0.799
Noca_0306
Hypothetical protein (98 aa)
 
          0.738
Noca_3323
Peptidase S8/S53 subtilisin kexin sedolisin (339 aa)
   
          0.509
Noca_0305
Hypothetical protein (105 aa)
              0.478
Noca_3218
Polysaccharide deacetylase (465 aa)
   
          0.468
Noca_1550
Polysaccharide deacetylase (244 aa)
   
          0.428
Noca_2057
Polysaccharide deacetylase (252 aa)
   
          0.415
Noca_0119
Hypothetical protein (246 aa)
   
          0.409
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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