STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_03303-oxoacid CoA-transferase, A subunit; KEGG: fal:FRAAL3148 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (succinyl CoA:3-oxoacid CoA-transferase) (OXCT A); TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase. (257 aa)    
Predicted Functional Partners:
Noca_0331
KEGG: fra:Francci3_2503 3-oxoacid CoA-transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase.
 0.999
Noca_1015
KEGG: mmc:Mmcs_1703 3-oxoacid CoA-transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase.
 
 0.997
Noca_4562
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mpa:MAP0790 enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase.
  
 
 0.931
Noca_0149
hydroxymethylglutaryl-CoA lyase; PFAM: pyruvate carboxyltransferase; KEGG: sma:SAV5276 putative hydroxymethylglutaryl-CoA lyase.
  
 
 0.927
Noca_1371
KEGG: sma:SAV3512 putative thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.922
Noca_1797
acetyl-CoA acetyltransferase; KEGG: nfa:nfa10750 putative acyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.922
Noca_1828
acetyl-CoA acetyltransferase; KEGG: nfa:nfa34130 putative acyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.922
Noca_2734
PFAM: peptidase M22, glycoprotease; KEGG: nfa:nfa5210 putative lipid-transfer protein.
  
 
 0.922
Noca_2740
acetyl-CoA acetyltransferase; KEGG: rha:RHA1_ro04678 probable thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.922
Noca_2764
KEGG: rha:RHA1_ro04599 probable acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.922
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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