Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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Noca_0350Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: fra:Francci3_0863 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (680 aa)    
Predicted Functional Partners:
Noca_0351
Assimilatory nitrate reductase (NADH) beta subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mmc:Mmcs_3231 nitrite reductase (NAD(P)H) large subunit, NirB.
 
 0.998
Noca_0349
PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr2806 nitrite extrusion protein.
 
 
 0.989
Noca_0352
TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: fal:FRAAL1355 nitrite reductase, large subunit, nucleotide-binding.
 
 0.989
Noca_0353
TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: fra:Francci3_0795 nitrite reductase (NAD(P)H) large subunit, NirD.
 
  
 0.980
Noca_4465
PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; KEGG: mbo:Mb0090 possible formate hydrogenase HycQ (FHL); Belongs to the complex I 49 kDa subunit family.
  
 
 0.979
Noca_4025
TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: fra:Francci3_0795 nitrite reductase (NAD(P)H) large subunit, NirD.
 
  
 0.965
Noca_1345
PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO0213 putative nitrate/nitrite transporter protein.
 
 
 0.933
Noca_2884
KEGG: pac:PPA0659 conserved protein, putative NADH:ubiquinone oxidoreductase.
  
 
 0.927
Noca_1346
TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: sco:SCO6535 putative nitrate reductase alpha chain NarG; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
0.915
Noca_1349
TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase, gamma subunit; KEGG: mbo:Mb1765c probable nitrate reductase NarX.
    
 0.912
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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