Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0368KEGG: fal:FRAAL6570 hypothetical protein; putative TonB Box domain. (121 aa)    
Predicted Functional Partners:
Noca_0367
KEGG: sco:SCO3552 hypothetical protein.
       0.818
Noca_2519
KEGG: mmc:Mmcs_4641 hypothetical protein.
  
     0.552
Noca_4266
KEGG: mmc:Mmcs_0096 hypothetical protein.
  
     0.540
Noca_4671
Hypothetical protein.
  
     0.468
Noca_0057
KEGG: afm:Afu5g00510 hypothetical protein.
  
     0.452
Noca_0059
PFAM: extracellular solute-binding protein, family 1; KEGG: oih:OB0774 sugar ABC transporter sugar-binding protein; TC 3.A.1.1.-.
  
     0.435
Noca_4310
KEGG: cps:CPS_4816 hypothetical protein.
  
     0.429
Noca_2167
KEGG: mmc:Mmcs_3184 hypothetical protein.
  
     0.420
Noca_2344
PFAM: GCN5-related N-acetyltransferase; KEGG: sth:STH2617 aminoglycoside 6'-N-acetyltransferase.
  
     0.420
Noca_2699
KEGG: mpa:MAP4216 hypothetical protein.
  
     0.408
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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