STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0385Multiple monosaccharide ABC transporter membrane protein; PFAM: inner-membrane translocator; KEGG: sco:SCO2406 putative sugar transport permease; Belongs to the binding-protein-dependent transport system permease family. (429 aa)    
Predicted Functional Partners:
Noca_0383
Multiple monosaccharide-binding protein; KEGG: ret:RHE_CH03165 xylose ABC transporter, substrate-binding protein.
 
 0.996
Noca_0384
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lxx:Lxx00320 multiple sugar (arabinose, xylose, galactose, glucose, fucose) putative porter; TC 3.A.1.2.-.
 
 0.995
Noca_2376
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sma:SAV2247 putative periplasmic solute-binding protein; TC 3.A.1.2.-.
  
 0.816
Noca_3319
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_85 ABC transporter ATP binding protein; TC 3.A.1.2.-.
  
 0.707
Noca_3320
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: bxe:Bxe_C1270 ABC sugar transporter, periplasmic ligand binding protein; TC 3.A.1.2.-.
 
  
 0.674
Noca_2377
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO6010 probable ABC-transport system ATP binding protein; TC 3.A.1.2.-.
  
 0.655
Noca_0405
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psp:PSPPH_2279 ABC transporter protein, ATP binding component; TC 3.A.1.2.-.
  
 0.620
Noca_0807
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_2027 ABC transporter protein, ATP binding component; TC 3.A.1.2.-.
  
 0.600
Noca_0611
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fal:FRAAL2527 putative ATP-binding protein of sugar ABC transporter; TC 3.A.1.2.-.
  
 0.595
Noca_0076
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO0811 putative ABC transporter ATP-binding protein; TC 3.A.1.2.-.
  
 0.587
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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