STRINGSTRING
Noca_0385 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0385" - Inner-membrane translocator in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0385Inner-membrane translocator (429 aa)    
Predicted Functional Partners:
Noca_0383
Xylose ABC transporter, substrate-binding protein (361 aa)
 
  0.993
Noca_0384
ABC transporter-like protein (509 aa)
 
  0.989
Noca_2376
Periplasmic binding protein/LacI transcriptional regulator (376 aa)
 
  0.951
Noca_2377
ABC transporter-like protein (252 aa)
 
  0.882
Noca_3319
ABC transporter-like protein (499 aa)
 
  0.860
Noca_0807
ABC transporter-like protein (497 aa)
 
  0.837
Noca_0076
ABC transporter-like protein (507 aa)
 
  0.815
Noca_0611
ABC transporter-like protein (534 aa)
 
  0.815
Noca_0100
ABC transporter-like protein (527 aa)
 
  0.797
Noca_0808
Inner-membrane translocator (353 aa)
 
   
 
0.616
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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