STRINGSTRING
Noca_0397 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0397" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0397Hypothetical protein (308 aa)    
Predicted Functional Partners:
Noca_2998
Hypothetical protein (1342 aa)
   
          0.760
Noca_3001
Hypothetical protein (555 aa)
   
          0.748
Noca_2999
Type 11 methyltransferase (246 aa)
 
          0.744
Noca_0109
Hypothetical protein (797 aa)
   
          0.744
Noca_2229
Peptidoglycan-binding LysM (1086 aa)
   
          0.732
Noca_1271
Peptidase S1 and S6, chymotrypsin/Hap (280 aa)
   
          0.695
Noca_2996
Hypothetical protein (610 aa)
   
          0.670
Noca_1916
FAD linked oxidase domain-containing protein (459 aa)
   
          0.646
Noca_1677
Hypothetical protein (239 aa)
   
          0.641
Noca_4463
Major facilitator transporter (449 aa)
   
          0.618
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (6%) [HD]