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Noca_0409 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0409" - Short-chain dehydrogenase/reductase SDR in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0409Short-chain dehydrogenase/reductase SDR (248 aa)    
Predicted Functional Partners:
Noca_0410
Hypothetical protein (170 aa)
              0.861
Noca_0412
DSBA oxidoreductase (276 aa)
              0.799
Noca_0411
Vitamin K epoxide reductase (225 aa)
              0.796
Noca_4198
Short-chain dehydrogenase/reductase SDR (263 aa)
 
          0.779
Noca_1849
Short-chain dehydrogenase/reductase SDR (233 aa)
   
          0.766
Noca_0689
Short-chain dehydrogenase/reductase SDR (269 aa)
   
          0.749
Noca_0408
Thrombospondin type 3 repeat-containing protein (802 aa)
              0.646
araB
Ribulokinase (567 aa)
       
    0.616
Noca_1011
4-carboxymuconolactone decarboxylase (402 aa)
   
  0.607
Noca_3816
Short-chain dehydrogenase/reductase SDR (228 aa)
   
          0.528
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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