STRINGSTRING
Noca_0424 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0424" - Putative integral membrane protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0424Putative integral membrane protein (135 aa)    
Predicted Functional Partners:
Noca_0423
Hypothetical protein (107 aa)
              0.859
Noca_0425
NADH-flavin oxidoreductase (392 aa)
              0.787
Noca_0422
HemK family modification methylase (299 aa)
              0.661
Noca_4482
Hypothetical protein (389 aa)
   
          0.592
Noca_4667
Hypothetical protein (137 aa)
   
          0.590
Noca_1678
CDP-alcohol phosphatidyltransferase (660 aa)
   
          0.588
Noca_0503
ResB family protein (532 aa)
   
          0.587
Noca_4413
GDSL family lipase (266 aa)
   
          0.556
Noca_1398
Cell envelope-related transcriptional attenuator (481 aa)
   
          0.555
Noca_2338
Hypothetical protein (64 aa)
   
          0.554
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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