STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0430PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: eli:ELI_09720 esterase. (305 aa)    
Predicted Functional Partners:
Noca_1878
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: eli:ELI_09720 esterase.
  
  
 
0.921
Noca_0429
PFAM: GCN5-related N-acetyltransferase; KEGG: rha:RHA1_ro06613 hypothetical protein.
       0.783
Noca_4256
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mpa:MAP3006c LipN.
  
     0.773
Noca_2793
PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: rha:RHA1_ro06856 possible esterase/lipase.
  
     0.561
Noca_0431
TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: sma:SAV1635 hypothetical protein.
       0.546
Noca_0432
RNA polymerase, sigma subunit, ECF family; PFAM: DNA gyrase C-terminal repeat, beta-propeller; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sco:SCO2742 putative sigma factor.
       0.546
Noca_1882
PFAM: FAD dependent oxidoreductase; KEGG: nfa:nfa43490 putative monooxygenase.
  
 0.477
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
   0.458
Noca_0524
TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; KEGG: pac:PPA1932 NADH dehydrogenase I chain E.
    
   0.450
Noca_3698
KEGG: nfa:nfa47010 putative monooxygenase.
  
 0.441
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.