STRINGSTRING
Noca_0434 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0434" - Binding-protein-dependent transport systems inner membrane component in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0434Binding-protein-dependent transport systems inner membrane component (544 aa)    
Predicted Functional Partners:
Noca_0433
ABC transporter periplasmic-binding protein (359 aa)
 
 
  0.996
Noca_0435
ABC transporter-like protein (332 aa)
 
   
    0.993
Noca_0436
Hypothetical protein (353 aa)
              0.787
Noca_2071
ABC transporter-like protein (362 aa)
 
 
  0.775
Noca_3228
Spermidine/putrescine ABC transporter ATPase; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system (377 aa)
 
 
  0.769
Noca_3217
Spermidine/putrescine ABC transporter ATPase (352 aa)
 
 
  0.753
Noca_2020
ABC transporter-like protein (353 aa)
 
 
  0.743
Noca_2022
Extracellular solute-binding protein (333 aa)
   
 
  0.701
Noca_0437
acyl-CoA oxidase domain-containing protein (657 aa)
              0.551
Noca_3680
ABC transporter-like protein (364 aa)
       
  0.524
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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