Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_0435PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO5648 ABC transporter ATP binding protein. (332 aa)    
Predicted Functional Partners:
Noca_0434
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO5647 ABC transporter integral membrane protein.
 
 0.993
Noca_0433
TIGRFAM: ABC transporter, periplasmic binding protein, thiB subfamily; PFAM: extracellular solute-binding protein, family 1; KEGG: sco:SCO5646 putative solute binding lipoprotein.
 
  
 0.970
Noca_2070
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO3454 putative ABC-transporter membrane protein.
 
 
 0.847
Noca_3226
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV2588 putative polyamine ABC-transporter integral membrane protein.
 
 
 0.826
Noca_2069
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cyb:CYB_0132 ABC transporter, permease protein.
 
 
 0.818
Noca_3214
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV1735 putative ABC transporter permease protein.
 
 
 0.815
Noca_3215
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV1736 putative ABC transporter permease protein.
 
 
 0.805
Noca_3227
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV2589 putative polyamine ABC-transporter permease protein.
 
 
 0.784
Noca_1068
NifC-like ABC-type porter; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 0.755
Noca_0436
KEGG: pca:Pcar_1759 hypothetical protein.
       0.705
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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