STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0455PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: fal:FRAAL6729 putative amino acid ABC transporter amino acid-binding protein. (318 aa)    
Predicted Functional Partners:
Noca_0453
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV7406 putative ABC transporter permease protein.
 
 0.999
Noca_0454
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fal:FRAAL6728 putative ABC transporter permease protein.
 
 0.999
Noca_0452
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV7409 putative ABC transporter ATP-binding protein.
 
 0.998
Noca_4334
KEGG: pac:PPA0648 hypothetical protein.
  
    0.824
Noca_0934
KEGG: sma:SAV5684 hypothetical protein.
  
    0.642
Noca_4175
PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: mpa:MAP3255 pyruvate decarboxylase; Belongs to the TPP enzyme family.
 
    0.538
Noca_2649
PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: sma:SAV6686 FK-506 binding protein, peptidyl-prolyl cis-trans isomerase.
      
 0.483
Noca_1935
PFAM: ABC-3 protein; KEGG: sco:SCO2507 putative metal transport ABC transporter.
  
  
  0.450
Noca_4263
Phosphate ABC transporter substrate-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.
  
 
 0.419
Noca_2400
PFAM: extracellular solute-binding protein, family 5; KEGG: sma:SAV3151 ABC transporter protein BldKB.
     
 0.404
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.