STRINGSTRING
Noca_0474 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0474" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0474Hypothetical protein (256 aa)    
Predicted Functional Partners:
Noca_0475
Ppx/GppA phosphatase (311 aa)
   
        0.773
Noca_0476
Xylose isomerase domain-containing protein (262 aa)
              0.767
Noca_4674
Alanine racemase domain-containing protein (351 aa)
   
          0.719
Noca_1191
N-acetyltransferase GCN5 (296 aa)
   
          0.715
Noca_4675
Integral membrane protein (496 aa)
   
        0.689
Noca_0477
TetR family transcriptional regulator (202 aa)
              0.666
Noca_3931
Major facilitator transporter (449 aa)
   
          0.636
Noca_3138
ErfK/YbiS/YcfS/YnhG family protein (402 aa)
   
          0.634
Noca_4433
Hypothetical protein (278 aa)
   
          0.612
Noca_0478
ABC transporter-like protein (249 aa)
              0.589
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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