Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Noca_0480PFAM: Proline dehydrogenase; KEGG: tfu:Tfu_0434 proline dehydrogenase. (316 aa)    
Predicted Functional Partners:
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
   
 0.971
Noca_3107
PFAM: LOR/SDH bifunctional enzyme conserved domain protein; KEGG: fal:FRAAL5090 hypothetical protein.
 
  
  0.923
Noca_0088
PFAM: Proline dehydrogenase; KEGG: tfu:Tfu_0434 proline dehydrogenase.
  
  
 
0.906
Noca_0089
TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: tfu:Tfu_0433 delta-1-pyrroline-5-carboxylate dehydrogenase 1.
 
 0.826
Noca_1220
TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: tfu:Tfu_0433 delta-1-pyrroline-5-carboxylate dehydrogenase 1.
 
 0.809
Noca_1116
Succinate semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: mes:Meso_4451 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.688
Noca_4281
PFAM: aldehyde dehydrogenase; KEGG: rha:RHA1_ro04375 aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
 
 
 0.687
Noca_2160
PFAM: aldehyde dehydrogenase; KEGG: rha:RHA1_ro05333 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.669
Noca_0846
PFAM: aldehyde dehydrogenase; KEGG: bxe:Bxe_A3599 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.667
Noca_4473
PFAM: aldehyde dehydrogenase; KEGG: rpc:RPC_0104 succinate-semialdehyde dehydrogenase (NAD(P)+); Belongs to the aldehyde dehydrogenase family.
 
 
 0.663
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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