STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0498KEGG: sma:SAV6229 secreted protein. (389 aa)    
Predicted Functional Partners:
Noca_0488
KEGG: sma:SAV4734 hypothetical protein.
 
     0.514
hemL
TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: sma:SAV4795 putative glutamate-1-semialdehyde 2,1-aminotransferase.
       0.485
Noca_0502
PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: sco:SCO4473 putative cytochrome biogenesis related protein.
     
 0.472
Noca_0500
PFAM: Phosphoglycerate mutase; KEGG: sma:SAV4796 phosphoglycerate mutase.
       0.471
Noca_0501
PFAM: Redoxin domain protein; KEGG: pac:PPA0325 hypothetical protein.
       0.471
Noca_0503
PFAM: ResB family protein; KEGG: sco:SCO4474 putative integral membrane protein.
 
     0.441
Noca_0343
PFAM: peptidase S1 and S6, chymotrypsin/Hap; Colicin V production protein; KEGG: fra:Francci3_4292 colicin V production protein.
  
    0.438
crcB-2
Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
   
  
 0.420
Noca_1817
KEGG: sma:SAV4459 hypothetical protein.
  
     0.402
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.