STRINGSTRING
Noca_0498 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0498" - Secreted protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0498Secreted protein (389 aa)    
Predicted Functional Partners:
Noca_3431
Cobalt transport protein (374 aa)
   
          0.597
Noca_0754
Lytic transglycosylase catalytic subunit (291 aa)
 
  0.577
Noca_0501
Redoxin domain-containing protein (200 aa)
   
 
  0.553
Noca_3384
Glycoside hydrolase family 3 protein (631 aa)
 
 
    0.544
Noca_3704
Hypothetical protein (366 aa)
   
        0.537
Noca_1692
Hypothetical protein (420 aa)
   
        0.531
Noca_2037
Hypothetical protein (154 aa)
   
          0.527
Noca_2557
Hypothetical protein (202 aa)
   
          0.525
Noca_3138
ErfK/YbiS/YcfS/YnhG family protein (402 aa)
 
          0.517
hemL
Glutamate-1-semialdehyde 2,1-aminomutase (445 aa)
              0.511
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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