STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
menGDemethylmenaquinone methyltransferase / 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). (229 aa)    
Predicted Functional Partners:
menA
1,4-dihydroxy-2-naphtoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
    
 0.919
Noca_0421
PFAM: NmrA family protein; KEGG: lxx:Lxx16700 hypothetical protein.
    
  0.900
Noca_0636
PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: mpa:MAP3035 putative Trp repressor binding protein.
    
  0.900
Noca_1499
PFAM: NmrA family protein; KEGG: rha:RHA1_ro03485 hypothetical protein.
    
  0.900
Noca_2181
PFAM: NmrA family protein; KEGG: lxx:Lxx16700 hypothetical protein.
    
  0.900
Noca_0534
Trans-hexaprenyltranstransferase; PFAM: Polyprenyl synthetase; KEGG: sco:SCO4583 putative polyprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
  
 0.783
Noca_3328
phosphatidyl-N-methylethanolamine N-methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rxy:Rxyl_0122 methyltransferase type 11.
 
     0.717
Noca_0518
PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: sma:SAV3383 lipoprotein.
     
 0.536
nuoA
NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.
 
     0.508
Noca_0531
KEGG: nfa:nfa26570 putative NADH dehydrogenase I chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I).
 
   
 0.508
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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