STRINGSTRING
Noca_0544 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0544" - Deoxyribose-phosphate aldolase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0544Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate (231 aa)    
Predicted Functional Partners:
Noca_3526
Phosphoglucomutase/phosphomannomutase alpha/beta/subunit (550 aa)
 
 
  0.984
Noca_2095
Aldehyde dehydrogenase (516 aa)
 
  0.969
Noca_4281
Aldehyde dehydrogenase (481 aa)
   
  0.965
Noca_4188
Aldehyde dehydrogenase (452 aa)
   
  0.965
Noca_4031
Acetaldehyde dehydrogenase (511 aa)
   
  0.965
Noca_3634
Aldehyde dehydrogenase (480 aa)
   
  0.965
Noca_3222
Aldehyde dehydrogenase (477 aa)
   
  0.965
Noca_1421
Aldehyde dehydrogenase (490 aa)
   
  0.965
Noca_1188
Aldehyde dehydrogenase (461 aa)
   
  0.965
Noca_3530
Aldehyde dehydrogenase (289 aa)
       
    0.964
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (15%) [HD]