STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0565PFAM: phage integrase family protein; KEGG: sco:SCO5349 integrase. (459 aa)    
Predicted Functional Partners:
Noca_0566
Hypothetical protein; KEGG: sco:SCO5348 excisionase.
 
   
 0.943
Noca_3946
PFAM: protein of unknown function DUF1470; KEGG: sma:SAV2986 hypothetical protein.
  
     0.476
Noca_2694
KEGG: sma:SAV7509 serine/threonine protein kinase.
  
     0.472
Noca_2309
Hypothetical protein.
  
    0.439
Noca_0564
PFAM: protein of unknown function DUF520; KEGG: mpa:MAP4063c hypothetical protein; Belongs to the UPF0234 family.
       0.421
Noca_4689
PFAM: GCN5-related N-acetyltransferase; KEGG: fra:Francci3_4539 conserved hypothetical protein.
  
     0.414
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.