Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_0595PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rxy:Rxyl_1873 (2Fe-2S)-binding protein. (168 aa)    
Predicted Functional Partners:
Noca_0596
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rxy:Rxyl_1872 carbon-monoxide dehydrogenase.
 0.998
Noca_0594
PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: rpb:RPB_3113 molybdopterin dehydrogenase, FAD-binding.
 0.993
Noca_4271
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: ctc:CTC02477 putative carbon-monoxide dehydrogenase, large subunit.
 
 0.976
Noca_1169
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rpb:RPB_4416 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding.
 
 0.961
Noca_0612
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rxy:Rxyl_1874 carbon-monoxide dehydrogenase.
 
 0.956
Noca_1637
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: dge:Dgeo_2604 xanthine dehydrogenase.
     0.923
Noca_0586
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: aor:AO090020000701 monoamine oxidase Pfam: FAD_binding_3 HI0933_like FAD_binding_2 GIDA DAO Amino_oxidase.
     
  0.900
Noca_1167
PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: sme:SMb20130 putative dehydrogenase protein.
 
 0.856
Noca_4273
PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: sme:SMb20130 putative dehydrogenase protein.
 
 0.854
Noca_1491
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rha:RHA1_ro03489 probable carbon monoxide dehydrogenase large subunit.
 
 0.838
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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