STRINGSTRING
Noca_0621 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0621" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0621Hypothetical protein (130 aa)    
Predicted Functional Partners:
Noca_0622
FAD dependent oxidoreductase (463 aa)
 
          0.680
Noca_4148
Basic membrane lipoprotein (357 aa)
 
          0.562
Noca_4284
Putative coenzyme PQQ synthesis protein (254 aa)
   
          0.531
Noca_0041
Extracellular solute-binding protein (460 aa)
   
          0.498
Noca_4493
Phenylacetic acid degradation protein paaN (557 aa)
 
          0.488
Noca_0620
Substrate-binding protein LysR (307 aa)
              0.463
Noca_0817
TetR family transcriptional regulator (210 aa)
   
          0.453
Noca_4454
Dehydrogenase, E1 component (726 aa)
   
          0.452
Noca_1113
FAD dependent oxidoreductase (473 aa)
 
          0.446
Noca_4444
FAD dependent oxidoreductase (523 aa)
   
        0.439
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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