STRINGSTRING
Noca_0630 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0630" - Transposase, mutator type in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0630Transposase, mutator type (361 aa)    
Predicted Functional Partners:
Noca_0631
Putative transposase (48 aa)
            0.888
Noca_0582
IstB ATP binding domain-containing protein (259 aa)
 
          0.596
Noca_0582
IstB ATP binding domain-containing protein (259 aa)
 
          0.596
Noca_1720
Transposase IS116/IS110/IS902 family protein (409 aa)
 
          0.552
Noca_1720
Transposase IS116/IS110/IS902 family protein (409 aa)
   
          0.540
Noca_0581
Integrase catalytic subunit (517 aa)
 
          0.425
Noca_0581
Integrase catalytic subunit (517 aa)
 
          0.425
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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