Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Noca_0634PFAM: FAD dependent oxidoreductase; KEGG: bam:Bamb_3196 FAD dependent oxidoreductase. (476 aa)    
Predicted Functional Partners:
Noca_0632
PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rha:RHA1_ro04979 probable ATPase, MoxR family.
       0.716
Noca_0633
PFAM: protein of unknown function DUF182; KEGG: mmc:Mmcs_0488 protein of unknown function DUF182.
       0.714
Noca_3225
PFAM: aminotransferase class-III; KEGG: sma:SAV2612 putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.648
Noca_3229
PFAM: extracellular solute-binding protein, family 1; KEGG: sma:SAV2591 putative ABC-transporter polyamine-binding lipoprotein.
 
   
 0.535
Noca_3227
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV2589 putative polyamine ABC-transporter permease protein.
 
    0.486
Noca_0618
PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sme:SMa0257 probable methylamine.
 
 
 0.472
Noca_3230
PFAM: regulatory protein, AsnC/Lrp family; KEGG: fra:Francci3_3779 transcriptional regulator, AsnC family.
 
  
 0.420
Noca_3226
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV2588 putative polyamine ABC-transporter integral membrane protein.
 
     0.416
Noca_1011
TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: alpha/beta hydrolase fold; Carboxymuconolactone decarboxylase; KEGG: mmc:Mmcs_1701 4-carboxymuconolactone decarboxylase.
  
  0.401
Noca_3836
PFAM: alpha/beta hydrolase fold; KEGG: sma:SAV5711 hydrolase.
  
 
  0.400
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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