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Noca_0645 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0645" - 4-aminobutyrate aminotransferase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_06454-aminobutyrate aminotransferase (452 aa)    
Predicted Functional Partners:
Noca_0646
Succinate semialdehyde dehydrogenase (459 aa)
   
  0.998
Noca_4626
Methylmalonate-semialdehyde dehydrogenase (498 aa)
 
  0.989
Noca_4598
Succinate semialdehyde dehydrogenase (485 aa)
   
  0.987
Noca_4473
Succinate semialdehyde dehydrogenase (486 aa)
   
  0.987
Noca_4188
Aldehyde dehydrogenase (452 aa)
   
  0.987
Noca_3633
Succinate-semialdehyde dehydrogenase (540 aa)
   
  0.987
Noca_1116
Succinate semialdehyde dehydrogenase (482 aa)
   
  0.987
Noca_0846
Aldehyde dehydrogenase (493 aa)
   
  0.987
Noca_4281
Aldehyde dehydrogenase (481 aa)
   
  0.982
Noca_2095
Aldehyde dehydrogenase (516 aa)
   
  0.982
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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