STRINGSTRING
Noca_0656 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0656" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0656Hypothetical protein (299 aa)    
Predicted Functional Partners:
Noca_0655
Fumarylacetoacetate hydrolase (391 aa)
 
          0.951
Noca_0657
Homogentisate 1,2-dioxygenase (404 aa)
 
          0.939
Noca_2305
Hypothetical protein (149 aa)
   
          0.707
Noca_1295
4-hydroxyphenylpyruvate dioxygenase (397 aa)
 
          0.685
Noca_0658
Aldo/keto reductase (288 aa)
              0.618
Noca_0472
Type 11 methyltransferase (251 aa)
   
          0.585
Noca_0159
Hypothetical protein (400 aa)
   
          0.524
Noca_1487
Hypothetical protein (438 aa)
   
          0.523
Noca_1508
UvrD/REP helicase (1060 aa)
   
          0.516
Noca_3169
Hypothetical protein (198 aa)
   
          0.489
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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