STRINGSTRING
murB protein (Nocardioides sp. JS614) - STRING interaction network
"murB" - UDP-N-acetylenolpyruvoylglucosamine reductase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
murBUDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation (340 aa)    
Predicted Functional Partners:
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation (446 aa)
  0.999
Noca_2672
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (508 aa)
 
  0.994
Noca_3068
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (504 aa)
 
  0.960
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein (461 aa)
 
 
  0.951
murD
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) (488 aa)
 
  0.941
murG
UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N- acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) (365 aa)
 
 
  0.931
Noca_0671
Dehydratase (127 aa)
 
          0.924
Noca_3291
D-alanine--D-alanine ligase; Cell wall formation (373 aa)
 
  0.900
Noca_0670
Hypothetical protein (133 aa)
 
          0.878
Noca_3486
D-alanine--D-alanine ligase; Cell wall formation (311 aa)
 
  0.833
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (10%) [HD]