STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0680Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: rha:RHA1_ro09081 ABC sugar transporter, permease component; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family. (343 aa)    
Predicted Functional Partners:
Noca_0678
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpm:BURPS1710b_A1655 ribose ABC transporter, ATP-binding protein; TC 3.A.1.2.-.
 
 0.987
Noca_0100
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro09082 ABC sugar transporter, ATP-binding component; TC 3.A.1.2.-.
 
 0.971
Noca_0807
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_2027 ABC transporter protein, ATP binding component; TC 3.A.1.2.-.
 
 0.971
Noca_0679
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: hso:HS_0765 ABC-type sugar-binding periplasmic protein; TC 3.A.1.2.-.
 
 0.968
Noca_0075
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: cgb:cg1413 secreted sugar-binding protein; TC 3.A.1.2.-.
 
 0.938
Noca_0588
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: fal:FRAAL2528 hypothetical protein; TC 3.A.1.2.-.
 
 0.938
Noca_0099
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: rha:RHA1_ro02908 possible ABC sugar transporter, substrate binding component; TC 3.A.1.2.-.
 
 0.927
Noca_0604
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: fal:FRAAL2528 hypothetical protein; TC 3.A.1.2.-.
 
 0.921
Noca_0806
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: ret:RHE_PC00149 putative sugar ABC transporter, substrate-binding protein; TC 3.A.1.2.-.
 
 0.912
Noca_2377
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO6010 probable ABC-transport system ATP binding protein; TC 3.A.1.2.-.
 
 0.871
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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