Noca_0680 protein (Nocardioides sp. JS614) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

Noca_0680

Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: rha:RHA1_ro09081 ABC sugar transporter, permease component; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family. (343 aa)

Predicted Functional Partners:

Noca_0678

0.987

Noca_0611

0.973

Noca_0076

0.972

Noca_0100

0.972

Noca_0807

0.972

Noca_3319

0.876

Noca_0405

0.875

Noca_0384

0.869

Noca_2377

0.869

Noca_0679

0.856

Your Current Organism:

Nocardioides sp. JS614

NCBI taxonomy Id: 196162
Other names: N. sp. JS614

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Noca_0076	Noca_0679	Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO0811 putative ABC transporter ATP-binding protein; TC 3.A.1.2.-.	Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: hso:HS_0765 ABC-type sugar-binding periplasmic protein; TC 3.A.1.2.-.	0.496
Noca_0076	Noca_0680	Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO0811 putative ABC transporter ATP-binding protein; TC 3.A.1.2.-.	Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: rha:RHA1_ro09081 ABC sugar transporter, permease component; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.	0.972
Noca_0100	Noca_0679	Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro09082 ABC sugar transporter, ATP-binding component; TC 3.A.1.2.-.	Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: hso:HS_0765 ABC-type sugar-binding periplasmic protein; TC 3.A.1.2.-.	0.496
Noca_0100	Noca_0680	Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro09082 ABC sugar transporter, ATP-binding component; TC 3.A.1.2.-.	Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: rha:RHA1_ro09081 ABC sugar transporter, permease component; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.	0.972
Noca_0384	Noca_0679	Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lxx:Lxx00320 multiple sugar (arabinose, xylose, galactose, glucose, fucose) putative porter; TC 3.A.1.2.-.	Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: hso:HS_0765 ABC-type sugar-binding periplasmic protein; TC 3.A.1.2.-.	0.496
Noca_0384	Noca_0680	Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lxx:Lxx00320 multiple sugar (arabinose, xylose, galactose, glucose, fucose) putative porter; TC 3.A.1.2.-.	Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: rha:RHA1_ro09081 ABC sugar transporter, permease component; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.	0.869
Noca_0405	Noca_0679	Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psp:PSPPH_2279 ABC transporter protein, ATP binding component; TC 3.A.1.2.-.	Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: hso:HS_0765 ABC-type sugar-binding periplasmic protein; TC 3.A.1.2.-.	0.496
Noca_0405	Noca_0680	Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psp:PSPPH_2279 ABC transporter protein, ATP binding component; TC 3.A.1.2.-.	Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: rha:RHA1_ro09081 ABC sugar transporter, permease component; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.	0.875
Noca_0611	Noca_0679	Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fal:FRAAL2527 putative ATP-binding protein of sugar ABC transporter; TC 3.A.1.2.-.	Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: hso:HS_0765 ABC-type sugar-binding periplasmic protein; TC 3.A.1.2.-.	0.496
Noca_0611	Noca_0680	Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fal:FRAAL2527 putative ATP-binding protein of sugar ABC transporter; TC 3.A.1.2.-.	Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: rha:RHA1_ro09081 ABC sugar transporter, permease component; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.	0.973
Noca_0678	Noca_0679	Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpm:BURPS1710b_A1655 ribose ABC transporter, ATP-binding protein; TC 3.A.1.2.-.	Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: hso:HS_0765 ABC-type sugar-binding periplasmic protein; TC 3.A.1.2.-.	0.987
Noca_0678	Noca_0680	Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpm:BURPS1710b_A1655 ribose ABC transporter, ATP-binding protein; TC 3.A.1.2.-.	Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: rha:RHA1_ro09081 ABC sugar transporter, permease component; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.	0.987
Noca_0679	Noca_0076	Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: hso:HS_0765 ABC-type sugar-binding periplasmic protein; TC 3.A.1.2.-.	Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO0811 putative ABC transporter ATP-binding protein; TC 3.A.1.2.-.	0.496
Noca_0679	Noca_0100	Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: hso:HS_0765 ABC-type sugar-binding periplasmic protein; TC 3.A.1.2.-.	Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro09082 ABC sugar transporter, ATP-binding component; TC 3.A.1.2.-.	0.496
Noca_0679	Noca_0384	Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: hso:HS_0765 ABC-type sugar-binding periplasmic protein; TC 3.A.1.2.-.	Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lxx:Lxx00320 multiple sugar (arabinose, xylose, galactose, glucose, fucose) putative porter; TC 3.A.1.2.-.	0.496
Noca_0679	Noca_0405	Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: hso:HS_0765 ABC-type sugar-binding periplasmic protein; TC 3.A.1.2.-.	Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psp:PSPPH_2279 ABC transporter protein, ATP binding component; TC 3.A.1.2.-.	0.496
Noca_0679	Noca_0611	Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: hso:HS_0765 ABC-type sugar-binding periplasmic protein; TC 3.A.1.2.-.	Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fal:FRAAL2527 putative ATP-binding protein of sugar ABC transporter; TC 3.A.1.2.-.	0.496
Noca_0679	Noca_0678	Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: hso:HS_0765 ABC-type sugar-binding periplasmic protein; TC 3.A.1.2.-.	Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpm:BURPS1710b_A1655 ribose ABC transporter, ATP-binding protein; TC 3.A.1.2.-.	0.987
Noca_0679	Noca_0680	Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: hso:HS_0765 ABC-type sugar-binding periplasmic protein; TC 3.A.1.2.-.	Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: rha:RHA1_ro09081 ABC sugar transporter, permease component; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.	0.856
Noca_0679	Noca_0807	Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: hso:HS_0765 ABC-type sugar-binding periplasmic protein; TC 3.A.1.2.-.	Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_2027 ABC transporter protein, ATP binding component; TC 3.A.1.2.-.	0.496

page 1 of 2

Server load: low (16%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About