STRINGSTRING
Noca_0704 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0704" - Virulence factor Mce family protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0704Virulence factor Mce family protein (348 aa)    
Predicted Functional Partners:
Noca_0702
Hypothetical protein (275 aa)
 
   
    0.995
Noca_0701
Hypothetical protein (261 aa)
 
   
    0.995
Noca_0700
ABC transporter-like protein (333 aa)
 
   
    0.995
Noca_0703
Virulence factor Mce family protein (425 aa)
 
          0.968
Noca_2826
Hypothetical protein (257 aa)
 
   
    0.960
Noca_2825
Hypothetical protein (279 aa)
 
   
    0.957
Noca_0708
Virulence factor Mce family protein (424 aa)
 
          0.927
Noca_0707
Virulence factor Mce family protein (472 aa)
 
          0.927
Noca_2824
Virulence factor Mce family protein (436 aa)
 
          0.858
Noca_2823
Virulence factor Mce family protein (361 aa)
   
   
 
0.815
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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