Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Noca_0718KEGG: hne:HNE_2670 putative lipoprotein. (387 aa)    
Predicted Functional Partners:
Noca_0721
PFAM: glycosyl transferase, family 2; General secretory system II, protein E domain protein; KEGG: ttj:TTHA0743 glycosyltransferase related protein.
  
  
 0.790
Noca_0717
Phosphate ABC transporter substrate-binding protein, PhoT family; KEGG: gvi:glr0014 phosphate ABC transporter periplasmic phosphate-binding protein; TC 3.A.1.7.1.
     
 0.780
Noca_0716
Hypothetical protein.
       0.773
Noca_0719
KEGG: sma:SAV4404 hypothetical protein.
       0.773
Noca_0720
KEGG: mmc:Mmcs_0533 hypothetical protein.
       0.773
Noca_3972
PFAM: PKD domain containing protein; KEGG: sde:Sde_3982 protein of unknown function DUF37.
 
     0.704
Noca_1605
PFAM: protein of unknown function DUF214; KEGG: sco:SCO6365 putative integral membrane protein.
  
     0.586
Noca_0806
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: ret:RHE_PC00149 putative sugar ABC transporter, substrate-binding protein; TC 3.A.1.2.-.
  
 
   0.536
Noca_2142
Hypothetical protein; KEGG: rpb:RPB_1061 protocatechuate 4,5-dioxygenase.
  
     0.511
Noca_0679
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: hso:HS_0765 ABC-type sugar-binding periplasmic protein; TC 3.A.1.2.-.
  
 
   0.497
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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