Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Noca_0724PFAM: iron-containing alcohol dehydrogenase; KEGG: rxy:Rxyl_2381 iron-containing alcohol dehydrogenase. (418 aa)    
Predicted Functional Partners:
Noca_4031
Acetaldehyde dehydrogenase; KEGG: lin:lin1143 hypothetical protein.
 
 0.939
Noca_0725
FAD linked oxidase domain protein; PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: rha:RHA1_ro00345 possible oxidoreductase, N-termminal.
 
  
 0.862
Noca_2363
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mmc:Mmcs_3405 alcohol dehydrogenase GroES-like protein.
  
 
 0.789
Noca_3322
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pto:PTO1249 alcohol dehydrogenase.
  
 
 0.789
Noca_1874
PFAM: Radical SAM domain protein; KEGG: ecp:ECP_4763 hypothetical protein YjjW.
 
  
 0.717
Noca_3184
Fructose PTS system EIIBC or EIIC component; TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system, EIIC; phosphotransferase system PTS, fructose-specific IIB subunit; KEGG: mmc:Mmcs_0080 phosphotransferase system, fructose IIC component; TC 4.A.2.1.4; TC 4.A.2.1.4; TC 4.A.2.1.4.
  
  
 0.646
Noca_2954
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.643
Noca_3022
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: sco:SCO2026 putative glutamate synthase large subunit.
  
  
 0.634
Noca_0726
KEGG: pen:PSEEN4336 hypothetical protein.
       0.562
Noca_0728
KEGG: mmc:Mmcs_1279 hypothetical protein.
       0.562
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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